Whole-genome resequencing of two elite sires for the detection of haplotypes under selection in dairy cattle Supporting Information
نویسندگان
چکیده
and Thimmapuram, Jyothi, "Whole-genome resequencing of two elite sires for the detection of haplotypes under selection in dairy cattle Supporting Information" (2012). Cyber Center Publications. Paper 602.
منابع مشابه
Whole-genome resequencing of two elite sires for the detection of haplotypes under selection in dairy cattle.
Using a combination of whole-genome resequencing and high-density genotyping arrays, genome-wide haplotypes were reconstructed for two of the most important bulls in the history of the dairy cattle industry, Pawnee Farm Arlinda Chief ("Chief") and his son Walkway Chief Mark ("Mark"), each accounting for ∼7% of all current genomes. We aligned 20.5 Gbp (∼7.3× coverage) and 37.9 Gbp (∼13.5× covera...
متن کاملDetection of Haplotypes Associated with Prenatal Death in Dairy Cattle and Identification of Deleterious Mutations in GART, SHBG and SLC37A2
The regular decrease of female fertility over time is a major concern in modern dairy cattle industry. Only half of this decrease is explained by indirect response to selection on milk production, suggesting the existence of other factors such as embryonic lethal genetic defects. Genomic regions harboring recessive deleterious mutations were detected in three dairy cattle breeds by identifying ...
متن کاملIdentification of a Nonsense Mutation in CWC15 Associated with Decreased Reproductive Efficiency in Jersey Cattle
With the recent advent of genomic tools for cattle, several recessive conditions affecting fertility have been identified and selected against, such as deficiency of uridine monophosphate synthase, complex vertebral malformation, and brachyspina. The current report refines the location of a recessive haplotype affecting fertility in Jersey cattle using crossover haplotypes, discovers the causat...
متن کاملDetection of Bovine Viral Diarrhea Virus Using a Nested RT-PCR Assay in Bulk Milk Samples of Dairy Cattle Herds in Suburb of Mashhad-Iran
Bovine viral diarrhoea virus (BVDV) is an important pathogen of dairy cattle. In this study, bulk milk samples representing a total of 4105 milking cows, from 18 dairy cattle herds in the suburb of Mashhad- Iran, were tested for presence of BVDV by the use of a nested reverse transcription polymerase chain reaction (Nested RT- PCR) assay. Non of the cows in the herds had been vaccinated against...
متن کاملEstimates of Repeatability and Heritability of Productive Trait in Holstein Dairy Cattle
Dairy cattle breeding programs have been based in the selection for traits related to milk production. In this research a data set of 63 herds of East Azerbaijan province Holstein cattle, collected during 2002-2013 by the Iranian Animal Breeding Center was used to estimate the repeatability and heritability of three traits of economic importance. Genetic parameters for first three lactations of...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
دوره شماره
صفحات -
تاریخ انتشار 2015